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Publications - Publications Archive
CotH3 mediates fungal invasion of host cells during mucormycosis, The Journal of clinical investigation. 2013-12-20
Draft Genome Sequences of Human Pathogenic Fungus Geomyces pannorum Sensu Lato and Bat White Nose Syndrome Pathogen Geomyces (Pseudogymnoascus) destructans, Genome announcements. 2013-12-19
Anal microbiota profiles in HIV-positive and HIV-negative MSM, AIDS (London, England). 2013-12-11
Genetic variation in vitro and in vivo of an attenuated Lassa vaccine candidate, Journal of virology. 2013-12-11
Simultaneous transcriptional profiling of bacteria and their host cells, PloS one. 2013-12-04
Microbiota Dynamics in Patients Treated with Fecal Microbiota Transplantation for Recurrent Clostridium difficile Infection, PloS one. 2013-11-26
Genetic architecture of quantitative traits and complex diseases, Current opinion in genetics & development. 2013-11-26
Bacterial genome sequencing in the clinic: bioinformatic challenges and solutions, Nature reviews. Genetics. 2013-11-26
Enterotoxigenic Escherichia coli secrete a highly conserved mucin-degrading metalloprotease to effectively engage intestinal epithelial cells, Infection and immunity. 2013-11-18
MetaRef: a pan-genomic database for comparative and community microbial genomics, Nucleic acids research. 2013-11-06
A divergent Pseudomonas aeruginosa palmitoyltransferase essential for cystic fibrosis-specific lipid A, Molecular microbiology. 2013-11-06
MIxS-BE: a MIxS extension defining a minimum information standard for sequence data from the built environment, The ISME journal. 2013-10-24
Association between the vaginal microbiota, menopause status, and signs of vulvovaginal atrophy, Menopause (New York, N.Y.). 2013-10-21
Characterizing the Temporal Dynamics of Human Papillomavirus DNA Detectability Using Short-Interval Sampling, Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology. 2013-10-15
Microbiome, sex hormones, and immune responses in the reproductive tract: Challenges for vaccine development against sexually transmitted infections, Vaccine. 2013-10-14
Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation, BMC genomics. 2013-10-10
Characterization of the Bacterial Community of the Chemically Defended Hawaiian Sacoglossan Elysia rufescens, Applied and environmental microbiology. 2013-09-06
Inhibitory saccadic dysfunction is associated with cerebellar injury in multiple sclerosis, Human brain mapping. 2013-09-03
Cortical negative motor network in comparison with sensorimotor network: a cortico-cortical evoked potential study, Cortex; a journal devoted to the study of the nervous system and behavior. 2013-08-26
In vitro evolution of an archetypal enteropathogenic Escherichia coli strain, Journal of bacteriology. 2013-08-02
Evolutionary Modeling of Genotype-Phenotype Associations, and Application to Primate Coding and Non-coding mtDNA Rate Variation, Evolutionary bioinformatics online. 2013-07-28
Menstrual Cycle and Detectable Human Papillomavirus in Reproductive-age Women: A Time Series Study, The Journal of infectious diseases. 2013-07-24
Genus-optimized strategy for the identification of chlamydial type III secretion substrates, Pathogens and disease. 2013-07-19
Draft Genome Sequences of Three O157 Enteropathogenic Escherichia coli Isolates, Genome announcements. 2013-07-18
Refining the pathovar paradigm via phylogenomics of the attaching and effacing Escherichia coli, Proceedings of the National Academy of Sciences of the United States of America. 2013-07-15
Identification of genes critical for resistance to infection by West Nile virus using RNA-Seq analysis, Viruses. 2013-07-08
Fine-scale patterns of population stratification confound rare variant association tests, PloS one. 2013-07-04
Great ape genetic diversity and population history, Nature. 2013-07-03
Draft genome sequences of five recent human uropathogenic Escherichia coli isolates, Pathogens and disease. 2013-07-02
Are changes to the common rule necessary to address evolving areas of research? A case study focusing on the human microbiome project, The Journal of law, medicine & ethics : a journal of the American Society of Law, Medicine & Ethics. 2013-06-27
Utilizing transcriptomics to identify mediators of pathogenesis in Shigella flexneri: characterization of intracellular growth regulator, icgR, Infection and immunity. 2013-06-10
Defining the RGG/RG Motif, Molecular cell. 2013-06-10
Phenotypic, genomic, and transcriptional characterization of Streptococcus pneumoniae interacting with human pharyngeal cells, BMC genomics. 2013-06-09
Differential response of the cynomolgus macaque gut microbiota to Shigella infection, PloS one. 2013-06-05
Genome sequences of 65 Helicobacter pylori strains isolated from asymptomatic individuals and patients with gastric cancer, peptic ulcer disease, or gastritis, Pathogens and disease. 2013-05-23
Genome Sequence of Salmonella enterica Serotype Tennessee Strain CDC07-0191, Implicated in the 2006-2007 Multistate Food-Borne Outbreak Linked to Peanut Butter in the United States, Genome announcements. 2013-05-23
Impact of oral typhoid vaccination on the human gut microbiota and correlations with s. Typhi-specific immunological responses, PloS one. 2013-04-24
Male circumcision significantly reduces prevalence and load of genital anaerobic bacteria, mBio. 2013-04-16
Gut microbiota, tight junction protein expression, intestinal resistance, bacterial translocation and mortality following cholestasis depend on the genetic background of the host, Gut microbes. 2013-04-15
Regulation of copper toxicity by Candida albicans GPA2, Eukaryotic cell. 2013-04-12
Regulatory Role of Glycerol in Candida albicans Biofilm Formation, mBio. 2013-04-09
Differential expression analysis for paired RNA-seq data, BMC bioinformatics. 2013-03-27
Quantitative Polymerase Chain Reaction for Detection of Shigella Improves Ascertainment of Shigella Burden in Children with Moderate to Severe Diarrhea in Low Income Countries, Journal of clinical microbiology. 2013-03-27
Genomics of Loa loa, a Wolbachia-free filarial parasite of humans, Nature genetics. 2013-03-24
Significant changes in the skin microbiome mediated by the sport of roller derby, PeerJ. 2013-03-12
Immune status, antibiotic medication and pH are associated with changes in the stomach fluid microbiota, The ISME journal. 2013-03-07
Whole-Genome Draft Sequences of 26 Enterohemorrhagic Escherichia coli O157:H7 Strains, Genome announcements. 2013-02-28
CloVR-ITS: Automated internal transcribed spacer amplicon sequence analysis pipeline for the characterization of fungal microbiota, Microbiome. 2013-02-04
Draft Genome Sequence of the Methicillin-Resistant Staphylococcus aureus Isolate MRSA-M2, Genome announcements. 2013-01-31
Genome Sequence of the Human Abscess Isolate Streptococcus intermedius BA1, Genome announcements. 2013-01-31
The human microbiome: from symbiosis to pathogenesis, Annual review of medicine. 2013-01-18
Reorganization of posterior language area in temporal lobe epilepsy: a cortico-cortical evoked potential study, Epilepsy research. 2013-01-11
Analysis of 6,515 exomes reveals the recent origin of most human protein-coding variants, Nature. 2013-01-10
Microbiome, demystifying the role of microbial communities in the biosphere, Microbiome. 2013-01-09