Publications - Publications 2024

Potter AD, Edwards VL, D'Mello A, Gray MC, Shetty AC, Forehand AL, Westlake CS, Lamb ER, Zhao X, Ragland SA, Criss AK, Tettelin H

Dual species transcriptomics reveals conserved metabolic and immunologic processes in interactions between human neutrophils and Neisseria gonorrhoeae, PLoS pathogens. 2024 Jul 08

Tuddenham S, Gajer P, Holm JB, Brown SE, Forney L, Ravel J, Ghanem KG, Brotman RM

Comparison of shipping versus immediate freezer storage of vaginal samples for vaginal microbiota assessment, Sexually transmitted infections. 2024 Jul 02

Laboulaye R, Borda V, Chen S, North KE, Kaplan R, O'Connor TD

ClOneHORT: Approaches for Improved Fidelity in Generative Models of Synthetic Genomes, bioRxiv : the preprint server for biology. 2024 Jun 29

Vaikakkara Chithran A, Allan DW, O'Connor TP

Adult expression of the cell adhesion protein Fasciclin 3 is required for the maintenance of adult olfactory interneurons, Journal of cell science. 2024 Jun 27

Gutierrez R, Chan AY, Tsuen Lai SW, Itoh S, Lee DH, Sun K, Battad A, Chen S, O'Connor TR, Shuck SC

Lack of mismatch repair enhances resistance to methylating agents for cells deficient in oxidative demethylation, The Journal of biological chemistry. 2024 Jun 24

Fastbom J, Jonasdottir Bergman G, Holm J, Hanberger H, Strålin K, Walther S, Alfredsson J, State M, Borg N, Nyman Iliadou A

Use of drugs for hypertension or heart failure and the risk of death in COVID-19: association with loop-diuretics, European journal of clinical pharmacology. 2024 Jun 24

Li X, Ma B, Ji W, Dou S, Zhou H, Zhang H, Wang J, Hu Y, Shen X

Impact of Lime Saturation Factor on Alite-Ye'Elimite Cement Synthesis and Hydration, Materials (Basel, Switzerland). 2024 Jun 20

Alizadeh M, Wong U, Siaton BC, Patil SA, George L, Raufman JP, Scott WH, von Rosenvinge EC, Ravel J, Cross RK

Inflammatory Bowel Disease-Associated Arthritis Is Associated with Concomitant Autoimmune and Inflammatory Disorders, Digestive diseases and sciences. 2024 Jun 20

Kavaliauskas P, Gu Y, Hasin N, Graf KT, Alqarihi A, Shetty AC, McCracken C, Walsh TJ, Ibrahim AS, Bruno VM

Multiple roles for hypoxia inducible factor 1-alpha in airway epithelial cells during mucormycosis, Nature communications. 2024 Jun 20

Belot A, Puy H, Hamza I, Bonkovsky HL

Update on heme biosynthesis, tissue-specific regulation, heme transport, relation to iron metabolism and cellular energy, Liver international : official journal of the International Association for the Study of the Liver. 2024 Jun 18

Ament SA, Campbell RR, Lobo MK, Receveur JP, Agrawal K, Borjabad A, Byrareddy SN, Chang L, Clarke D, Emani P, Gabuzda D, Gaulton KJ, Giglio M, Giorgi FM, Gok B, Guda C, Hadas E, Herb BR, Hu W, Huttner A, Ishmam MR, Jacobs MM, Kelschenbach J, Kim DW, Lee C, Liu S, Liu X, Madras BK, Mahurkar AA, Mash DC, Mukamel EA, Niu M, O'Connor RM, Pagan CM, Pang APS, Pillai P, Repunte-Canonigo V, Ruzicka WB, Stanley J, Tickle T, Tsai SA, Wang A, Wills L, Wilson AM, Wright SN, Xu S, Yang J, Zand M, Zhang L, Zhang J, Akbarian S, Buch S, Cheng CS, Corley MJ, Fox HS, Gerstein M, Gummuluru S, Heiman M, Ho YC, Kellis M, Kenny PJ, Kluger Y, Milner TA, Moore DJ, Morgello S, Ndhlovu LC, Rana TM, Sanna PP, Satterlee JS, Sestan N, Spector SA, Spudich S, Tilgner HU, Volsky DJ, White OR, Williams DW, Zeng H

The single-cell opioid responses in the context of HIV (SCORCH) consortium, Molecular psychiatry. 2024 Jun 15

Yang K, Yang X, Jin C, Ding S, Liu T, Ma B, Sun H, Zhang J, Li Y

Global burden of type 1 diabetes in adults aged 65 years and older, 1990-2019: population based study, BMJ (Clinical research ed.). 2024 Jun 12

Piacentino D, Vizioli C, Barb JJ, Grant-Beurmann S, Bouhlal S, Battista JT, Jennings O, Lee MR, Schwandt ML, Walter P, Henderson WA, Chen K, Turner S, Yang S, Fraser CM, Farinelli LA, Farokhnia M, Leggio L

Gut microbial diversity and functional characterization in people with alcohol use disorder: A case-control study, PloS one. 2024 Jun 12

Engel CE, Fagan KK, Dorsey SB, Grider DJ

An Unexpected Post-Egg-Free Influenza Vaccine Granulomatous Reaction, The American Journal of dermatopathology. 2024 Jun 06

Elovitz M, Anton L, Cristancho A, Ferguson B, Joseph A, Ravel J

Vaginal microbes alter epithelial transcriptome and induce epigenomic modifications providing insight into mechanisms for susceptibility to adverse reproductive outcomes, Research square. 2024 May 31

McCann RS, Courneya JP, Donnelly M, Laufer MK, Mzilahowa T, Stewart K, Miles A, Takala-Harrison S, O'Connor TD,

Variation in spatial population structure in the species complex, bioRxiv : the preprint server for biology. 2024 May 31

Hrytsenko Y, Shea B, Elgart M, Kurniansyah N, Lyons G, Morrison AC, Carson AP, Haring B, Mitchell BD, Psaty BM, Jaeger BC, Gu CC, Kooperberg C, Levy D, Lloyd-Jones D, Choi E, Brody JA, Smith JA, Rotter JI, Moll M, Fornage M, Simon N, Castaldi P, Casanova R, Chung RH, Kaplan R, Loos RJF, Kardia SLR, Rich SS, Redline S, Kelly T, O'Connor T, Zhao W, Kim W, Guo X, Ida Chen YD, , Sofer T

Machine learning models for predicting blood pressure phenotypes by combining multiple polygenic risk scores, Scientific reports. 2024 May 30

Chenoweth JG, Colantuoni C, Striegel DA, Genzor P, Brandsma J, Blair PW, Krishnan S, Chiyka E, Fazli M, Mehta R, Considine M, Cope L, Knight AC, Elayadi A, Fox A, Hertzano R, Letizia AG, Owusu-Ofori A, Boakye I, Aduboffour AA, Ansong D, Biney E, Oduro G, Schully KL, Clark DV

Gene expression signatures in blood from a West African sepsis cohort define host response phenotypes, Nature communications. 2024 May 30

Zhong D, Wei S, Zhou H, He X, Qian B, Ma B, Hu Y, Ren X

The Influence of Retreated Lithium Slag with a High Content of Alkali, Sulfate and Fluoride on the Composition and the Microstructure of Autoclaved Aerated Concrete, Materials (Basel, Switzerland). 2024 May 27

Acosta A, Cifuentes L, Anazco D, O'Connor T, Hurtado M, Ghusn W, Campos A, Fansa S, McRae A, Madhusudhan S, Kolkin E, Ryks M, Harmsen W, Dayyeh BA, Hensrud D, Camilleri M

Unraveling the Variability of Human Satiation: Implications for Precision Obesity Management, Research square. 2024 May 23

Hopp MT, Vaidya SM, Grimmig KM, Strudthoff LJ, Clauser JC, Yuan X, Singh S, Müller J, Oldenburg J, Hamza I, Imhof D

Quantitative analysis of heme and hemoglobin for the detection of intravascular hemolysis, Analytica chimica acta. 2024 May 21

Pan Y, Bi C, Kochunov P, Shardell M, Smith JC, McCoy RG, Ye Z, Yu J, Lu T, Yang Y, Lee H, Liu S, Gao S, Ma Y, Li Y, Chen C, Ma T, Wang Z, Nichols T, Hong LE, Chen S

Brain-wide functional connectome analysis of 40,000 individuals reveals brain networks that show aging effects in older adults, bioRxiv : the preprint server for biology. 2024 May 17

Shetty AC, Sivinski J, Cornell J, McCracken C, Sadzewicz L, Mahurkar A, Wang XQ, Colloca L, Lin W, Pilli N, Kane MA, Seneviratne C

Peripheral blood transcriptomic profiling of molecular mechanisms commonly regulated by binge drinking and placebo effects, Scientific reports. 2024 May 10

Gwilliam K, Sperber M, Perry K, Rose KP, Ginsberg L, Paladugu N, Song Y, Milon B, Elkon R, Hertzano R

A cell type-specific approach to elucidate the role of miR-96 in inner ear hair cells, Frontiers in audiology and otology. 2024 May 09

Bateman NW, Abulez T, Tarney CM, Bariani MV, Driscoll JA, Soltis AR, Zhou M, Hood BL, Litzi T, Conrads KA, Jackson A, Oliver J, Ganakammal SR, Schneider F, Dalgard CL, Wilkerson MD, Smith B, Borda V, O'Connor T, Segars J, Shobeiri SA, Phippen NT, Darcy KM, Al-Hendy A, Conrads TP, Maxwell GL

Multi-omic Analysis of Uterine Leiomyomas in Self-Described Black and White Women: Molecular Insights into Health Disparities, American journal of obstetrics and gynecology. 2024 May 07

Schaefer A, Yang B, Schroeder HA, Harit D, Humphry MS, Zeitlin L, Whaley KJ, Ravel J, Fischer WA, Lai SK

ZMapp reduces diffusion of Ebola viral particles in fresh human cervicovaginal mucus, Emerging microbes & infections. 2024 May 07

Colloca L, Mocci E, Wang Y, Massalee R, Chen S, White J, Johnson K, Patron Fidalgo GM, Wilson GM, Goldman D, Dorsey SG

Transcriptomic Profiles Associated with Experimental Placebo Effects in Chronic Pain, Clinical pharmacology and therapeutics. 2024 May 06

Shardell M, Chen C, McCoy RG

Doubly Robust Causal Modeling to Evaluate Device Implantation, JAMA internal medicine. 2024 May 06

Guo B, Takala-Harrison S, O'Connor TD

Benchmarking and Optimization of Methods for the Detection of Identity-By-Descent in , bioRxiv : the preprint server for biology. 2024 May 05

Xu W, Kim JS, Yang T, Ya A, Sadzewicz L, Tallon L, Harris B, Sarkaria J, Jin F, Waldman T

STAG2 mutations regulate 3D genome organization, chromatin loops, and Polycomb signaling in glioblastoma multiforme, The Journal of biological chemistry. 2024 May 03

Carter KA, Tuddenham S, Brotman RM

Dequalinium Chloride-An Emerging Option in the Sparse Landscape of Bacterial Vaginosis Therapies, JAMA network open. 2024 May 01

Rybak JM, Xie J, Martin-Vicente A, Guruceaga X, Thorn HI, Nywening AV, Ge W, Souza ACO, Shetty AC, McCracken C, Bruno VM, Parker JE, Kelly SL, Snell HM, Cuomo CA, Rogers PD, Fortwendel JR

A secondary mechanism of action for triazole antifungals in Aspergillus fumigatus mediated by hmg1, Nature communications. 2024 Apr 29

Yang WW, Matyas JJ, Li Y, Lee H, Lei Z, Renn CL, Faden AI, Dorsey SG, Wu J

Dissecting Genetic Mechanisms of Differential Locomotion, Depression, and Allodynia after Spinal Cord Injury in Three Mouse Strains, Cells. 2024 Apr 29

Hofstaedter CE, O'Keefe IP, Met CM, Wu L, Vanderwoude J, Shin S, Diggle SP, Riquelme SA, Rasko DA, Doi Y, Harro JM, Kopp BT, Ernst RK

Lipid A Structural Variants Induce Altered Immune Responses, American journal of respiratory cell and molecular biology. 2024 Apr 24

Ling X, Alexander GS, Molitoris J, Choi J, Schumaker L, Tran P, Mehra R, Gaykalova D, Ren L

Radiomic biomarkers of locoregional recurrence: prognostic insights from oral cavity squamous cell carcinoma preoperative CT scans, Frontiers in oncology. 2024 Apr 23

Holm JB, Gajer P, Ravel J

SpeciateIT and vSpeciateDB: Novel, fast and accurate per sequence 16S rRNA gene taxonomic classification of vaginal microbiota, bioRxiv : the preprint server for biology. 2024 Apr 22

French JN, Pua VB, Laboulaye R, Leal TP, Olivas MC, Lima-Costa MF, Horta BL, Barreto ML, Tarazona-Santos E, Mata I, O'Connor TD

Comparing the effect of imputation reference panel composition in four distinct Latin American cohorts, bioRxiv : the preprint server for biology. 2024 Apr 15

Liu Y, Ma B, Tian J, Zhao C

Coupled conversion of polyethylene and carbon dioxide catalyzed by a zeolite-metal oxide system, Science advances. 2024 Apr 12

Sun H, Ma B, Jin C, Li Z, Song X, Bu Y, Liu T, Han X, Yang X, Yang K, Xu D, Zhang J, Li Y

Global, Regional, and National Burdens of Stroke in Children and Adolescents From 1990 to 2019: A Population-Based Study, Stroke. 2024 Apr 09

Gavzy SJ, Kensiski A, Saxena V, Lakhan R, Hittle L, Wu L, Iyyathurai J, Dhakal H, Lee ZL, Li L, Lee YS, Zhang T, Lwin HW, Shirkey MW, Paluskievicz CM, Piao W, Mongodin EF, Ma B, Bromberg JS

Early Immunomodulatory Program Triggered by Protolerogenic Bifidobacterium pseudolongum Drives Cardiac Transplant Outcomes, Transplantation. 2024 Apr 08

Ma B, Duan L, Ma Y, Bu F, Lan K, Zhao T, Chen L, Zu L, Peng L, Zhao Z, Xu J, Zhong S, Aldhayan DM, Al-Enizi AM, Elzatahry A, Li W, Yang W, Zhao D

Implanting colloidal nanoparticles into single-crystalline zeolites for Catalytic Dehydration, Angewandte Chemie (International ed. in English). 2024 Apr 05

Mattick JSA, Bromley RE, Watson KJ, Adkins RS, Holt CI, Lebov JF, Sparklin BC, Tyson TS, Rasko DA, Hotopp JCD

Deciphering Bacterial and Archaeal Transcriptional Dark Matter and Its Architectural Complexity, bioRxiv : the preprint server for biology. 2024 Apr 02

León Y, Honigsberg R, Rasko DA, Faherty CS

Gastrointestinal signals in supplemented media reveal a role in adherence for the autotransporter gene, Gut microbes. 2024 Mar 28

Mauck C, Thurman A, Jensen JT, Schreiber CA, Baker J, Hou MY, Chavoustie S, Dart C, Wu H, Ravel J, Gajer P, Herold BC, Jacot T, Zack N, Hatheway J, Friend D

Safety Testing of Ovaprene: an Investigational Non-Hormonal Monthly Vaginal Contraceptive, Contraception. 2024 Mar 27

Shang J, Coe KJ, Lim HK, Chen L, Khatri BB, Salter R, Mitra K, Iyer R

Application of Covalent Binding Body Burden in the HμREL Human Hepatocyte Coculture Model for Reactivity Risk Assessment of Metabolically Low Turnover Drugs, Chemical research in toxicology. 2024 Mar 26

Jabra-Rizk MA, Wang T, Sofras D, Montelongo-Jauregui D, Paiva T, Carolus H, Dufrene Y, Alfaifi A, McCracken C, Bruno V, Dijck PV

Functional Redundancy in Candida auris Cell Surface Adhesins Crucial for Cell-Cell Interaction and Aggregation, Research square. 2024 Mar 22

Wang TW, Sofras D, Montelongo-Jauregui D, Paiva TO, Carolus H, Dufrêne YF, Alfaifi AA, McCracken C, Bruno VM, Van Dijck P, Jabra-Rizk MA

Functional Redundancy in Cell Surface Adhesins Crucial for Cell-Cell Interaction and Aggregation, bioRxiv : the preprint server for biology. 2024 Mar 21

Ma G, Zhu X, Ma B, Lassleben H

Employee Proactive Personality and Career Growth: The Role of Proactive Behavior and Leader Proactive Personality, Behavioral sciences (Basel, Switzerland). 2024 Mar 21

Gong Y, Xia Y, Su Z, Wang X, Kou Y, Ma B, Hou Y, Shi Z

A C-Type Lectin, RfCTL27, Activates the Immune Defense in the Red Palm Weevil (A.G. Olivier, 1791) (Coleoptera: Curculionidae: Dryophthorinae) by the Recognition of Gram-Negative Bacteria, Insects. 2024 Mar 21

Joseph A, Anton L, Guan Y, Ferguson B, Mirro I, Meng N, France M, Ravel J, Elovitz MA

Extracellular vesicles from vaginal Gardnerella vaginalis and Mobiluncus mulieris contain distinct proteomic cargo and induce inflammatory pathways, NPJ biofilms and microbiomes. 2024 Mar 21

Chen J, Zhao T, Li H, Xu W, Maas K, Singh V, Chen MH, Dorsey SG, Starkweather AR, Cong XS

Multi-Omics Analysis of Gut Microbiota and Host Transcriptomics Reveal Dysregulated Immune Response and Metabolism in Young Adults with Irritable Bowel Syndrome, International journal of molecular sciences. 2024 Mar 20

Guo B, Borda V, Laboulaye R, Spring MD, Wojnarski M, Vesely BA, Silva JC, Waters NC, O'Connor TD, Takala-Harrison S

Strong positive selection biases identity-by-descent-based inferences of recent demography and population structure in Plasmodium falciparum, Nature communications. 2024 Mar 20

Powell AM, Ali Khan FZ, Ravel J, Elovitz MA

Untangling Associations of Microbiomes of Pregnancy and Preterm Birth, Clinics in perinatology. 2024 Mar 15

Hoffmann DE, von Rosenvinge EC, Roghmann MC, Palumbo FB, McDonald D, Ravel J

The DTC microbiome testing industry needs more regulation, Science (New York, N.Y.). 2024 Mar 14

Bernat N, Campbell R, Nam H, Basu M, Odesser T, Elyasaf G, Engeln M, Chandra R, Golden S, Ament S, Lobo MK, Kupchik YM

Multimodal interrogation of ventral pallidum projections reveals projection-specific signatures and effects on cocaine reward, The Journal of neuroscience : the official journal of the Society for Neuroscience. 2024 Mar 14

Rolandelli A, Laukaitis-Yousey HJ, Bogale HN, Singh N, Samaddar S, O'Neal AJ, Ferraz CR, Butnaru M, Mameli E, Xia B, Mendes MT, Butler LR, Marnin L, Cabrera Paz FE, Valencia LM, Rana VS, Skerry C, Pal U, Mohr SE, Perrimon N, Serre D, Pedra JHF

Tick hemocytes have a pleiotropic role in microbial infection and arthropod fitness, Nature communications. 2024 Mar 08

Tebben K, Yirampo S, Coulibaly D, Koné AK, Laurens MB, Stucke EM, Dembélé A, Tolo Y, Traoré K, Niangaly A, Berry AA, Kouriba B, Plowe CV, Doumbo OK, Lyke KE, Takala-Harrison S, Thera MA, Travassos MA, Serre D

Gene expression analyses reveal differences in children's response to malaria according to their age, Nature communications. 2024 Mar 06

Guo T, Zamuner F, Ting S, Chen L, Rooper L, Tamayo P, Fakhry C, Gaykalova D, Mehra R

Clinical and genomic characterization of chemoradiation-resistant HPV-positive oropharyngeal squamous cell carcinoma, Frontiers in oncology. 2024 Mar 05

Patel JN, Jiang C, Owzar K, Hertz DL, Wang J, Mulkey FA, Kelly WK, Halabi S, Furukawa Y, Lassiter C, Dorsey SG, Friedman PN, Small EJ, Carducci MA, Kelley MJ, Nakamura Y, Kubo M, Ratain MJ, Morris MJ, McLeod HL

Pharmacogenetic and clinical risk factors for bevacizumab-related gastrointestinal hemorrhage in prostate cancer patients treated on CALGB 90401 (Alliance), The pharmacogenomics journal. 2024 Mar 04

Ponciano JM, Gómez JP, Ravel J, Forney LJ

Inferring stability and persistence in the vaginal microbiome: A stochastic model of ecological dynamics, bioRxiv : the preprint server for biology. 2024 Mar 03

Sonthalia S, Li G, Blanco XM, Casella A, Liu J, Stein-O'Brien G, Caffo B, Adkins RS, Orvis J, Hertzano R, Mahurkar A, Gillis J, Werner J, Ma S, Micali N, Sestan N, Rakic P, Santpere G, Ament SA, Colantuoni C

transcriptome dissection of neocortical excitatory neurogenesis via joint matrix decomposition and transfer learning, bioRxiv : the preprint server for biology. 2024 Feb 28

O'Connor T, Ferguson A, Clegg BW, Pallett N, Midgley JJ, Shimbani J

Emergent trees in woodland: influence of elephant density on persistence attrition, PeerJ. 2024 Feb 26

Castellano CA, Sun T, Ravindranathan D, Hwang C, Balanchivadze N, Singh SRK, Griffiths EA, Puzanov I, Ruiz-Garcia E, Vilar-Compte D, Cárdenas-Delgado AI, McKay RR, Nonato TK, Ajmera A, Yu PP, Nadkarni R, O'Connor TE, Berg S, Ma K, Farmakiotis D, Vieira K, Arvanitis P, Saliby RM, Labaki C, El Zarif T, Wise-Draper TM, Zamulko O, Li N, Bodin BE, Accordino MK, Ingham M, Joshi M, Polimera HV, Fecher LA, Friese CR, Yoon JJ, Mavromatis BH, Brown JT, Russell K, Nanchal R, Singh H, Tachiki L, Moria FA, Nagaraj G, Cortez K, Abbasi SH, Wulff-Burchfield EM, Puc M, Weissmann LB, Bhatt PS, Mariano MG, Mishra S, Halabi S, Beeghly A, Warner JL, French B, Bilen MA,

The impact of cancer metastases on COVID-19 outcomes: A COVID-19 and Cancer Consortium registry-based retrospective cohort study, Cancer. 2024 Feb 20

Alizadeh M, Wong U, Siaton BC, Patil SA, George L, Raufman JP, Scott WH, von Rosenvinge EC, Ravel J, Cross RK

ExpLOring the role of the intestinal MiCrobiome in InflammATory bowel disease-AssocIated SpONdylarthritis (LOCATION-IBD), Heliyon. 2024 Feb 18

Carter KA, France MT, Rutt L, Bilski L, Martinez-Greiwe S, Regan M, Brotman RM, Ravel J

Sexual transmission of urogenital bacteria: whole metagenome sequencing evidence from a sexual network study, mSphere. 2024 Feb 15

Cantin LJ, Dunning Hotopp JC, Foster JM

Improved metagenome assemblies through selective enrichment of bacterial genomic DNA from eukaryotic host genomic DNA using ATAC-seq, Frontiers in microbiology. 2024 Feb 15

Hazzard B, Sá J, Bogale H, Pascini T, Ellis A, Amin S, Armistead J, Adams J, Wellems T, Serre D

Single-cell analyses of polyclonal Plasmodium vivax infections and their consequences on parasite transmission, Research square. 2024 Feb 13

Kucera CW, Chappell NP, Tian C, Richardson MT, Tarney CM, Hamilton CA, Chan JK, Kapp DS, Leath CA, Casablanca Y, Rojas C, Sitler CA, Wenzel L, Klopp A, Jones NL, Rocconi RP, Farley JH, O'Connor TD, Shriver CD, Bateman NW, Conrads TP, Phippen NT, Maxwell GL, Darcy KM

Survival disparities in non-Hispanic Black and White cervical cancer patients vary by histology and are largely explained by modifiable factors, Gynecologic oncology. 2024 Feb 09

Holm JB, France MT, Gajer P, Ma B, Brotman RM, Shardell M, Forney L, Ravel J

Correction: Integrating compositional and functional content to describe vaginal microbiomes in health and disease, Microbiome. 2024 Feb 06

Wan Y, Wang C, Zhang X, Yin Y, Liu M, Ma B, Duan L, Ma Y, Zhang W, Zheng C, Chao D, Wang F, Xia Y, Li W

Micelle-directed self-assembly of single-crystal-like mesoporous stoichiometric oxides for high-performance lithium storage, National science review. 2024 Feb 06

Robbins SJ, Brown SE, Stennett CA, Tuddenham S, Johnston ED, Wnorowski AM, Ravel J, He X, Mark KS, Brotman RM

Uterine fibroids and longitudinal profiles of the vaginal microbiota in a cohort presenting for transvaginal ultrasound, PloS one. 2024 Feb 05

Eshel M, Milon B, Hertzano R, Elkon R

The cells of the sensory epithelium, and not the stria vascularis, are the main cochlear cells related to the genetic pathogenesis of age-related hearing loss, American journal of human genetics. 2024 Feb 02

Rodriguez I, Rossi NM, Keskus AG, Xie Y, Ahmad T, Bryant A, Lou H, Paredes JG, Milano R, Rao N, Tulsyan S, Boland JF, Luo W, Liu J, O'Hanlon T, Bess J, Mukhina V, Gaykalova D, Yuki Y, Malik L, Billingsley KJ, Blauwendraat C, Carrington M, Yeager M, Mirabello L, Kolmogorov M, Dean M

Insights into the mechanisms and structure of breakage-fusion-bridge cycles in cervical cancer using long-read sequencing, American journal of human genetics. 2024 Jan 25

Winkler SS, Tian C, Casablanca Y, Bateman NW, Jokajtys S, Kucera CW, Tarney CM, Chan JK, Richardson MT, Kapp DS, Liao CI, Hamilton CA, Leath CA, Reddy M, Cote ML, O'Connor TD, Jones NL, Rocconi RP, Powell MA, Farley J, Shriver CD, Conrads TP, Phippen NT, Maxwell GL, Darcy KM

Racial, ethnic and country of origin disparities in aggressive endometrial cancer histologic subtypes, Gynecologic oncology. 2024 Jan 25

Meeker TJ, Kim HJ, Tulloch IK, Keaser ML, Seminowicz DA, Dorsey SG

Secondary analysis: heat and self-report pain sensitivity associate with biological sex and racialized sociocultural group but may not be mediated by anxiety or pain catastrophizing, Pain reports. 2024 Jan 24

Vagias H, Byrne ML, Millist L, White O, Clough M, Fielding J

Visuo-Cognitive Phenotypes in Early Multiple Sclerosis: A Multisystem Model of Visual Processing, Journal of clinical medicine. 2024 Jan 23

Meiller TF, Fraser CM, Grant-Beurmann S, Humphrys M, Tallon L, Sadzewicz LD, Jabra-Rizk MA, Alfaifi A, Kensara A, Molitoris JK, Witek M, Mendes WS, Regine WF, Tran PT, Miller RC, Sultan AS

A Longitudinal Metagenomic Comparative Analysis of Oral Microbiome Shifts in Patients Receiving Proton Radiation versus Photon Radiation for Head and Neck Cancer, Journal of cancer & allied specialties. 2024 Jan 22

Ren L, Ling X, Alexander G, Molitoris J, Choi J, Schumaker L, Mehra R, Gaykalova D

Radiomic Biomarkers of Locoregional Recurrence: Prognostic Insights from Oral Cavity Squamous Cell Carcinoma preoperative CT scans, Research square. 2024 Jan 22

Burris HH, Yang N, Riis V, Valeri L, South EC, Ravel J, Elovitz MA

The role of neighborhood deprivation in the cervicovaginal microbiota, American journal of obstetrics & gynecology MFM. 2024 Jan 19

Adediran TY, Robinson GL, Johnson JK, Liang Y, Bejo S, Leekha S, Rasko DA, Stine OC, Harris AD, Thom KA

Factors associated with patient-to-healthcare personnel (HCP) and HCP-to-subsequent patient transmission of methicillin-resistant , Infection control and hospital epidemiology. 2024 Jan 18

Ma B, Li Q, Zhang J, Mi Y, Tan W, Guo Z

Improvement of the Antioxidant and Antitumor Activities of Benzimidazole-Chitosan Quaternary Ammonium Salt on Drug Delivery Nanogels, Marine drugs. 2024 Jan 11

Dorsey SG, Mocci E, Lane MV, Krueger BK

Rapid effects of valproic acid on the fetal brain transcriptome: Implications for brain development and autism, Research square. 2024 Jan 10

Mehta R, Hochberg M, Shardell M, Ryan A, Dong Y, Beamer BA, Peer J, Stuart EA, Schuler M, Gallo JJ, Rathbun AM

Evaluation of Dynamic Effects of Depressive Symptoms on Physical Function in Knee Osteoarthritis, Arthritis care & research. 2024 Jan 10

Liu XY, Jiang RC, Ma B, Wang Y, Yang YZ, Xu C, Sun F, Tan BC

Maize requires Embryo defective27 for embryogenesis and seedling development, Plant physiology. 2024 Jan 10

Kumar A, Brown RA, Roufaeil DB, Gupta A, Lipford EL, Muthusamy D, Zalzman A, Hertzano R, Lowe T, Stains JP, Zalzman M

DeepFreeze 3D-biofabrication for Bioengineering and Storage of Stem Cells in Thick and Large-Scale Human Tissue Analogs, Advanced science (Weinheim, Baden-Wurttemberg, Germany). 2024 Jan 06

Jin Y, Yang X, Sun H, Zhang J, Yang S, Jiang S, Song Q, Zhang G, Ma B, Yang K, Pan L, Huang L, Li Y

Global, Regional, and National Burdens of Otitis Media From 1990 to 2019: A Population Based Study, Ear and hearing. 2024 Jan 05

Nguyen M, Clough M, Cruse B, van der Walt A, Fielding J, White OB

Exploring Factors That Prolong the Diagnosis of Myasthenia Gravis, Neurology. Clinical practice. 2024 Jan 04

Zheng Y, Xue J, Ma B, Huan Z, Wu C, Zhu Y

Mesoporous Bioactive Glass-Graphene Oxide Composite Aerogel with Effective Hemostatic and Antibacterial Activities, ACS applied bio materials. 2024 Jan 03

Hall B, Levy S, Dufault-Thompson K, Arp G, Zhong A, Ndjite GM, Weiss A, Braccia D, Jenkins C, Grant MR, Abeysinghe S, Yang Y, Jermain MD, Wu CH, Ma B, Jiang X

BilR is a gut microbial enzyme that reduces bilirubin to urobilinogen, Nature microbiology. 2024 Jan 03