- Resources
- Publications
Other - Software
Scientists and staff at IGS generate new genomic data and develop a number of new software tools that are freely available to the research community and public at large.
| Chain | Forging evolutionary links to underlying mechanisms |
| MAPGAPs | A set of tools to build and search protein multiple sequence alignments |
| Ergatis | A platform for building and executing analysis pipelines |
| IDEA - Interactive Display for Evolutionary Analyses | A tool to perform and visualize evolutionary analysis |
| Manatee | A web-based genome annotation tool |
| PhyloTrac | PhyloTrac is a software package for exploration and analysis of phylogenetic diversity from PhyloChip data |
| Sybil | A web-based comparative genome analysis tool |
| Workflow | A program to build and execute complex analysis pipelines on local computers and computational grids Data Download |
| BSR | The BLAST Score Ratio (BSR) approach, implemented in a Perl script, classifies all putative peptides within three genomes using a measure of similarity based on the ratio of BLAST scores. The output of the BSR analysis enables global visualization of the degree of proteome similarity between all three genomes |
Analysis Web Resources
| Sybil | Sybil is a web-based tool for visualizing and mining comparative genomic data |
| Gemina | A web-based system to identify infectious pathogens and their representative genomic sequences through selection of associated epidemiology metadata |
| Manatee | A web-based genome annotation and annotation visualization tool |
| HMP DACC | The central repository for all human microbiome project (HMP) data, providing specialized data management and analysis infrastructure to facilitate discoveries about the human microbiome. |